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Inferring resource competition in microbial communities from time series

The competition for resources is a defining feature of microbial communities. In many contexts, from soils to host-associated communities, highly diverse microbes are organized into metabolic groups or guilds with similar resource preferences. The …

Microbial functional guilds respond cohesively to rapidly fluctuating environments

Microbial communities experience environmental fluctuations across timescales from rapid changes in moisture, temperature, or light levels to long-term seasonal or climactic variations. Understanding how microbial populations respond to these changes …

Environmentally dependent interactions shape patterns in gene content across natural microbiomes

Sequencing surveys of microbial communities in hosts, oceans and soils have revealed ubiquitous patterns linking community composition to environmental conditions. While metabolic capabilities restrict the environments suitable for growth, the …

Functional phases encode the response of the soil microbiome to environmental change

A major challenge in microbiome research is understanding how natural communities respond to environmental change. The ecological, spatial, and chemical complexity of soils makes understanding how these communities respond metabolically to …

High-force application by a nanoscale DNA force spectrometer

A nanoscale DNA force spectrometer capable of applying tension and compression on biomolecules

A quantitative model for a nanoscale switch accurately predicts thermal actuation behavior

Evolutionary advantage of a dissociative search mechanism in DNA mismatch repair

Quantitative modeling of nucleosome unwrapping from both ends

Systematic study of the stochastic gravitational-wave background due to stellar core collapse